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taxize
taxize allows users to search over many taxonomic data sources for species names (scientific and common) and download up and downstream taxonomic hierarchical information - among other things.
The taxize book: https://taxize.dev
Package documentation: https://docs.ropensci.org/taxize/
Installation
Stable version from CRAN
install.packages("taxize")
Development version from GitHub
Windows users install Rtools first.
install.packages("remotes")
remotes::install_github("ropensci/taxize")
library('taxize')
Screencast
Contributing
See our CONTRIBUTING document.
Contributors
Collected via GitHub Issues: honors all contributors in alphabetical order. Code contributors are in bold.
afkoeppel - ahhurlbert - albnd - Alectoria - andzandz11 - anirvan - antagomir - arendsee - ArielGreiner - arw36 - ashenkin - ashiklom - benjaminschwetz - benmarwick - bienflorencia - binkySallly - bomeara - BridgettCollis - bw4sz - cboettig - cdeterman - ChrKoenig - chuckrp - clarson2191 - claudenozeres - cmzambranat - cparsania - daattali - DanielGMead - DarrenObbard - davharris - davidvilanova - diogoprov - dlebauer - dlenz1 - dougwyu - dschlaep - EDiLD - edwbaker - emhart - eregenyi - fdschneider - fgabriel1891 - fischhoff - fmichonneau - fozy81 - gedankenstuecke - gimoya - git-og - glaroc - gpli - gustavobio - hlapp - ibartomeus - Ironholds - jabard89 - jangorecki - jarioksa - jebyrnes - jeroen - jimmyodonnell - joelnitta - johnbaums - jonmcalder - jordancasey - josephwb - jsgosnell - JulietteLgls - jwilk - kamapu - karthik - katrinleinweber - KevCaz - kgturner - kmeverson - Koalha - ljvillanueva - maelle - Markus2015 - matutosi - mcsiple - MikkoVihtakari - millerjef - miriamgrace - mpnelsen - MUSEZOOLVERT - nate-d-olson - nmatzke - npch - ocstringham - p-neves - p-schaefer - padpadpadpad - paternogbc - patperu - pederengelstad - philippi - Phylloxera - pmarchand1 - pozsgaig - pssguy - raredd - rec3141 - Rekyt - RodgerG - rossmounce - sariya - sastoudt - scelmendorf - sckott - SimonGoring - snsheth - snubian - Squiercg - sunray1 - taddallas - tdjames1 - tmkurobe - toczydlowski - tpaulson1 - tpoisot - TrashBirdEcology - trvinh - vijaybarve - wcornwell - willpearse - wpetry - yhg926 - zachary-foster
Road map
Check out our milestones to see what we plan to get done for each version.
Meta
- Please report any issues or bugs.
- License: MIT
- Get citation information for
taxizein R doingcitation(package = 'taxize') - Please note that this package is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.
