CMCompare

Infernal covariance model comparison.

Compares two Infernal covariance models. Returns the common MaxiMin score and the offending RNA sequence. High scores point toward low discriminative power of the two models. Based on:

"Christian Höner zu Siederdissen, and Ivo L. Hofacker. 2010. Discriminatory power of RNA family models. Bioinformatics 26, no. 18: 453–59"

http://bioinformatics.oxfordjournals.org/content/26/18/i453.long