Description
Biosensor Development using Omics Data.
Description
A method for the quantitative prediction using omics data. This package provides functions to construct the quantitative prediction model using omics data.
README.md
OmicSense
The goal of OmicSense is to provide the functions to construct a prediction model of environments using noisy omics data linked with the environments based on OmicSense algorithm.
Installation
You can install the development version of OmicSense from GitHub with:
#install.packages("devtools")
devtools::install_github("takakoizumi/OmicSense")
Example
install.packages("OmicSense")
library(OmicSense)
basic example code
data(Pinus)
x.train <- Pinus[[1]]
x.test <- Pinus[[2]]
y <- Pinus[[3]]
cor(y, os.pred(x.train, y, newx = x.test, n.pred = 100))