Estimating Length-Based Indicators for Fish Stock.
#Install devtools package by following
install.packages("devtools")
unload if this package is in use previously
detach("package:aLBI", unload = T)
or remove the existing package by following code
remove.packages("aLBI")
Install the latest package
devtools::install_github("Ataher76/aLBI", force = T)
#Enter one or more numbers, or an empty line to skip updates: 1
calling the library
library(aLBI)
see the documentation of the first function
?FishPar
#or help(FishPar)
see the documentation of the secon function
?FishSS
or
help(FishSS)
estimating lenght parameters
estimatedParameters <- FishPar(data = lenfreq01, resample = 1000, progress = F)
#Extracting estimated length parameters estimatedParameters$estimated_length_par #Extracting estimated froese parameters estimatedParameters$estimated_froese_par #Extracting estimated frequency parameters estimatedParameters$estimated_freq_par #Extracting estimated LM_ratio estimatedParameters$LM_ratio #Extracting estimated Pobj estimatedParameters$Pobj
#Calling the second function StockStatus <- FishSS(data = CPdata, LM_ratio = 0.7, Pobj = 97, Pmat = 29.91881 , Popt = 25.46208 )
Extracting stock status
StockStatus$StockStatus StockStatus$Target_Cols.