Interface for 'All of Us' Researcher Workbench.

allofus R Package

The goal of the allofus R package is to streamline the use of R within the All of Us Researcher Workbench.

The allofus R package is a not affiliated with or endorsed by the All of Us Research Program.

The allofus package helps researchers query the database and build transparent and reproducible analysed pipeline. The package allows researchers to easily use other database packages, such as dbplyr and DBI, with the All of Us database. The package also includes functions to help researchers manage storage in their workspace and bucket, as well as take advantage of tools developed for OMOP CDM data.

Installation

Install the released version of allofus from CRAN:

install.packages("allofus")

Install the development version from Github:

install.packages("pak")
pak::pak("roux-ohdsi/allofus")

Use

Read through the getting started vignette to learn how to use the package.

Bugs

Please leave us comments, requests, and report bugs using the “Issues” tab on github located here: https://github.com/roux-ohdsi/allofus/issues.