r-baystability

Bayesian Stability Analysis of Genotype by Environment Interaction (GEI).

baystability: Bayesian Stability Analysis of Genotype by Environment Interaction (GEI)

Version : 0.1.0; Copyright (C) 2018-2024: License: GPL-2|GPL-3

Muhammad Yaseen^1,2, Diego Jarquin³, Sergio Perez-Elizalde⁴, Juan Burgueño⁵, Jose Crossa^6,7,8,9

1. School of Mathematical & Statistical Sciences, Clemson University, Clemson, South Carolina, USA
2. Department of Mathematics & Statistics, University of Agriculture Faisalabad, Pakistan
3. Agronomy Department, University of Florida, Gainesville, FL, United States
4. Colegio de Postgraduados, Montecillo,Estado de México 56230, México
5. Consultative Group on International Agricultural Research: CGIAR
6. Department of Statistics and Operations Research, and Distinguish Scientist Fellowship Program, King Saud University, Riyah, Saudi Arabia
7. AgCenter, Louisiana State University, Baton Rouge, Louisiana, USA
8. Colegio de Postgraduados, Montecillos, Mexico
9. International Maize and Wheat Improvement Center (CIMMYT), Mexico-Veracruz, Mexico

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Description

Performs general Bayesian estimation method of linear–bilinear models for genotype × environment interaction. The method is explained in Perez-Elizalde, S., Jarquin, D., and Crossa, J. (2011) (doi:10.1007/s13253-011-0063-9).

Installation

The package can be installed from CRAN as follows:

install.packages("baystability", dependencies = TRUE)

The development version can be installed from github as follows:

if (!require("remotes")) install.packages("remotes")
remotes::install_github("myaseen208/baystability")

What’s new

To know whats new in this version type:

news(package = "baystability")

Links

CRAN page

Github page

Documentation website

Citing baystability

To cite the methods in the package use:

citation("baystability")
To cite package 'baystability' in publications use:

  Muhammad Yaseen, Diego Jarquin, Sergio Perez-Elizalde, Juan Burgueño,
  Jose Crossa (2018). _baystability: Bayesian Stability Analysis of
  Genotype by Environment Interaction (GEI)_. R package version 0.1.0,
  <https://CRAN.R-project.org/package=baystability>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {baystability: Bayesian Stability Analysis of Genotype by Environment
Interaction (GEI)},
    author = {{Muhammad Yaseen} and {Diego Jarquin} and {Sergio Perez-Elizalde} and {Juan Burgueño} and {Jose Crossa}},
    year = {2018},
    note = {R package version 0.1.0},
    url = {https://CRAN.R-project.org/package=baystability},
  }