'parsnip' Engines for Survival Models.
censored 
censored is a parsnip extension package which provides engines for various models for censored regression and survival analysis.
Installation
You can install the released version of censored from CRAN with:
install.packages("censored")
And the development version from GitHub with:
# install.packages("pak")
pak::pak("tidymodels/censored")
Available models, engines, and prediction types
censored provides engines for the models in the following table. For examples, please see Fitting and Predicting with censored.
The time to event can be predicted with type = "time", the survival probability with type = "survival", the linear predictor with type = "linear_pred", the quantiles of the event time distribution with type = "quantile", and the hazard with type = "hazard".
| model | engine | time | survival | linear_pred | raw | quantile | hazard |
|---|---|---|---|---|---|---|---|
| bag_tree | rpart | ✔ | ✔ | ✖ | ✖ | ✖ | ✖ |
| boost_tree | mboost | ✔ | ✔ | ✔ | ✖ | ✖ | ✖ |
| decision_tree | rpart | ✔ | ✔ | ✖ | ✖ | ✖ | ✖ |
| decision_tree | partykit | ✔ | ✔ | ✖ | ✖ | ✖ | ✖ |
| proportional_hazards | survival | ✔ | ✔ | ✔ | ✖ | ✖ | ✖ |
| proportional_hazards | glmnet | ✔ | ✔ | ✔ | ✔ | ✖ | ✖ |
| rand_forest | partykit | ✔ | ✔ | ✖ | ✖ | ✖ | ✖ |
| rand_forest | aorsf | ✔ | ✔ | ✖ | ✖ | ✖ | ✖ |
| survival_reg | survival | ✔ | ✔ | ✔ | ✖ | ✔ | ✔ |
| survival_reg | flexsurv | ✔ | ✔ | ✔ | ✖ | ✔ | ✔ |
| survival_reg | flexsurvspline | ✔ | ✔ | ✔ | ✖ | ✔ | ✔ |
Contributing
This project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.
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If you think you have encountered a bug, please submit an issue.
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