Description
Mutational Signature Analysis Tools.
Description
Utility functions for mutational signature analysis as described in Alexandrov, L. B. (2020) <doi:10.1038/s41586-020-1943-3>. This package provides two groups of functions. One is for dealing with mutational signature "exposures" (i.e. the counts of mutations in a sample that are due to each mutational signature). The other group of functions is for matching or comparing sets of mutational signatures. 'mSigTools' stands for mutational Signature analysis Tools.
README.md
mSigTools
Purpose
Utility functions for mutational signature analysis.
Installation
Get the latest released version
if (!requireNamespace("remotes", quietly = TRUE)) {
install.packages("remotes")
}
remotes::install_github(repo = "Rozen-Lab/mSigTools")
Get the development version
Install mSigTools from the master branch on GitHub:
if (!requireNamespace("remotes", quietly = TRUE)) {
install.packages("remotes")
}
remotes::install_github(repo = "Rozen-Lab/mSigTools", ref = "master")
Reference manual
https://github.com/Rozen-Lab/mSigTools/blob/v1.0.7-branch/mSigTools_1.0.7.pdf.