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Description

Constructs Principal Surfaces.

Construct a principal surface that are two-dimensional surfaces that pass through the middle of a p-dimensional data set. They minimise the distance from the data points, and provide a nonlinear summary of data. The surfaces are nonparametric and their shape is suggested by the data. The formation of a surface is found using an iterative procedure which starts with a linear summary, typically with a principal component plane. Each successive iteration is a local average of the p-dimensional points, where an average is based on a projection of a point onto the nonlinear surface of the previous iteration. For more information on principal surfaces, see Ganey, R. (2019, "https://open.uct.ac.za/items/4e655d7d-d10c-481b-9ccc-801903aebfc8").

prinsurf

The goal of prinsurf is to construct a principal surface that is two-dimensional and passes through the middle of a $p$-dimensional dataset.

Installation

You can install the development version of prinsurf from GitHub with:

library(devtools)
devtools::install_github("RaeesaGaney91/prinsurf")

Example

This is a basic example on a simulated data set:

library(prinsurf)
surface <- principal.surface(X)
3D Plot

Report Bugs and Support

If you encounter any issues or have questions, please open an issue on the GitHub repository.

Metadata

Version

1.0

License

Unknown

Platforms (75)

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    FreeBSD
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