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Description

Quantitative Pest Risk Assessment at the Entry Step.

Supports risk assessors in performing the entry step of the quantitative Pest Risk Assessment. It allows the estimation of the amount of a plant pest entering a risk assessment area (in terms of founder populations) through the calculation of the imported commodities that could be potential pathways of pest entry, and the development of a pathway model. Two 'Shiny' apps based on the functionalities of the package are included, that simplify the process of assessing the risk of entry of plant pests. The approach is based on the work of the European Food Safety Authority (EFSA PLH Panel et al., 2018) <doi:10.2903/j.efsa.2018.5350>.

qPRAentry

qPRAentry is an R package encompassing functions for calculating and redistributing the potentially infected/infested quantity of commodities imported from countries where a pest of interest is present and estimating the amount of a pest entering a risk assessment area (in terms of potential founder populations landing in each region, e.g., European NUTS2).

The package comprises two Shiny apps: one for computing $N_{trade}$ and redistributing, and the other for executing the pathway model.

Installation

The latest version of qPRAentry can be installed and loaded as follows:

install.packages("qPRAentry")

Upload then the qPRAentry library and check the help function for the documentation:

library(qPRAentry)

?qPRAentry.

Metadata

Version

0.1.0

License

Unknown

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