Core File Structures and Workflows for 'RAVE'.

ravecore

The goal of ravecore is to provide storage infrastructure to read, process, and analyze intracranial electroencephalography and deep-brain stimulation in RAVE, a reproducible framework for analysis and visualization framework. This package supports BIDS or native file conventions to ingest signals in HDF5, Matlab, EDF, BrainVision, or BlackRock formats. For images, this package process images in NIfTI and FreeSurfer formats, providing brain imaging normalization to template brain, facilitate comprehensive electrode localization and 3D brain visualization. Other RAVE packages include:

• ravetools - signal and imaging tools
• ravepipeline - running pipelines and interactive modules
• ravedash - front-end user interface

See our official website for tutorials and documentations:

• https://rave.wiki

To cite the package and 3D viewer in general

• Magnotti, J. F., Wang, Z., & Beauchamp, M. S. (2020). RAVE: Comprehensive open-source software for reproducible analysis and visualization of intracranial EEG data. NeuroImage, 223, 117341.

If you use RAVE/YAEL for localization or brain normalization, cite

• Wang, Z., Magnotti, J. F., Zhang, X., & Beauchamp, M. S. (2023). YAEL: Your Advanced Electrode Localizer. Eneuro, 10(10).

Installation

Please check https://rave.wiki/posts/installation/installation.html for full installation guide.

For advanced developers, you can install the development version of ravecore with:

# install.packages("pak")
pak::pak("rave-ieeg/ravecore")