Description
A DNA Reference Library Manager.
Description
Reference database manager offering a set of functions to import, organize, clean, filter, audit and export reference genetic data. Provide functions to download sequence data from Bold Systems (<https://www.boldsystems.org/>) and NCBI GenBank <https://www.ncbi.nlm.nih.gov/genbank/>. Designed as an environment for semi-automatic and assisted construction of reference databases and to improve standardization and repeatability in barcoding and metabarcoding studies.
README.md
refdb: A reference database manager for R
The refdb package is a reference database manager offering a set of powerful functions to import, organize, clean, filter, audit and export reference genetic data. It has been designed as an environment for semi-automatic and assisted construction of reference databases and to improve standardization and repeatability in metabarcoding studies.
Installation
You can install the development version of refdb from GitHub.
remotes::install_github("fkeck/refdb")
Find more about the package (manual, vignettes, etc.): https://fkeck.github.io/refdb/