Description

Retinal Reconstruction Program.

Description

Reconstructs retinae by morphing a flat surface with cuts (a dissected flat-mount retina) onto a curvilinear surface (the standard retinal shape). It can estimate the position of a point on the intact adult retina to within 8 degrees of arc (3.6% of nasotemporal axis). The coordinates in reconstructed retinae can be transformed to visuotopic coordinates. For more details see Sterratt, D. C., Lyngholm, D., Willshaw, D. J. and Thompson, I. D. (2013) <doi:10.1371/journal.pcbi.1002921>.

README.md

cran.r-project.org

Funding Acknowledgements

The development of the initial version of Retistruct was supported by a Programme Grant from the UK Wellcome Trust (G083305) from 2008-2013.

Improvements to image handing and refactoring the code (released in v0.6.0) were supported by The Jackson Laboratory (Bar Harbor, ME, USA) Scientific Services Innovation Fund from 2016-2017 and an NIH R21 grant (EY027894) from 2018-2020 to Dr. Mark P. Krebs, The Jackson Laboratory.

The capabilities to reconstruct tissue comprised of separate fragments (released in v0.7.0) and to reconstruct 3D data comprising an overhead image and depth map (released in v0.7.2), and user interface improvements (released in v0.7.0) were supported by an NIH R21 grant (EY027894) from 2018-2020 to Dr. Mark P. Krebs, The Jackson Laboratory.

For full details go to the home page: http://davidcsterratt.github.io/retistruct/

r-retistruct

Funding Acknowledgements

Version

License

Status

Source

Homepage

Platforms (75)

Funding Acknowledgements

Version

License

Status

Source

Homepage

Platforms75 (75)

Platforms (75)