Description
A Null Model Algorithm to Analyze Cyclical Data in Ecology.
Description
Implements a null model analysis to quantify concurrent temporal niche overlap (i.e., activity or phenology) among biological identities (e.g., individuals, populations, species) using the Rosario randomization algorithm (Castro-Arellano et al. 2010) <doi:10.1111/j.2041-210X.2010.00031.x>.
README.md
rosario
The rosario package provides tools to quantify and visualize temporal niche overlap using Pianka and Czekanowski indices, and to simulate null models with the ROSARIO algorithm (Castro-Arellano et al. 2010).
Installation
You can install the development version of rosario from GitHub with:
# Install devtools if you don't have it
install.packages("devtools")
# Install rosario from GitHub
devtools::install_github("alrobles/rosario")
You can also get the official release version from CRAN
install.packages("rosario")
Learn More
Two vignettes demonstrate the full workflow and capabilities of the package:
Introduction to rosario
Overview ofrosarioworkflow.Real-world example
Demonstration ofrosarioworkflow with a real-world dataset.
You can also access them from within R:
vignette("introduction_to_rosario")
vignette("real_world_example")