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Description

Advanced Analytics and Testing Framework for Systematic Review Search Strategies.

Provides comprehensive analytics, reporting, and testing capabilities for systematic review search strategies. The package focuses on validating search performance, generating standardized 'PRISMA'-compliant reports, and ensuring reproducibility in evidence synthesis. Features include precision-recall analysis, cross-database performance comparison, benchmark validation against gold standards, sensitivity analysis, temporal coverage assessment, automated report generation, and statistical comparison of search strategies. Supports multiple export formats including 'CSV', 'Excel', 'RIS', 'BibTeX', and 'EndNote'. Includes tools for duplicate detection, search strategy optimization, cross-validation frameworks, meta-analysis of benchmark results, power analysis for study design, and reproducibility package creation. Optionally connects to 'PubMed' for direct database searching and real-time strategy comparison using the 'E-utilities' 'API'. Enhanced with bootstrap comparison methods, 'McNemar' test for strategy evaluation, and comprehensive visualization tools for performance assessment. Methods based on Manning et al. (2008) for information retrieval metrics, Moher et al. (2009) for 'PRISMA' guidelines, and Sampson et al. (2006) for systematic review search methodology.

searchAnalyzeR

R-CMD-check CRANstatus Lifecycle:experimental

searchAnalyzeR provides comprehensive analytics, reporting, and testing capabilities for systematic review search strategies. The package helps researchers optimize their search strategies, evaluate performance against gold standards, and generate PRISMA-compliant reports.

Key Features

  • ๐Ÿ” PubMed database API search integration
  • ๐Ÿ“Š Performance metrics calculation (precision, recall, F1-score, efficiency measures)
  • ๐ŸŽฏ Search strategy optimization with term effectiveness analysis
  • ๐Ÿ“ˆ Rich visualizations for search performance and temporal coverage
  • ๐Ÿ“‹ PRISMA-compliant reporting with flow diagrams
  • ๐Ÿ“„ Reproducibility tools for transparent research
  • โœ… Benchmark validation across multiple domains
  • ๐Ÿงน Duplicate detection with multiple algorithms
  • ๐Ÿ“ค Multi-format exports (CSV, Excel, RIS, BibTeX, EndNote)

Installation

You can install the development version of searchAnalyzeR from GitHub with:

# install.packages("devtools")
devtools::install_github("chaoliu-cl/searchAnalyzeR")

License

This project is licensed under the GPL-3 License.

Support


searchAnalyzeR is designed to make systematic review search strategy analysis more rigorous, transparent, and reproducible. Whether youโ€™re conducting a systematic review, meta-analysis, or methodological research on search strategies, this package provides the tools you need for comprehensive analysis.

Metadata

Version

0.1.0

License

Unknown

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