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Description

Simulate Experimental Crosses.

Simulate and plot general experimental crosses. The focus is on simulating genotypes with an aim towards flexibility rather than speed. Meiosis is simulated following the Stahl model, in which chiasma locations are the superposition of two processes: a proportion p coming from a process exhibiting no interference, and the remainder coming from a process following the chi-square model.

R/simcross

R-CMD-check CRAN_Status_Badge zenodo DOI

Karl W Broman


R/simcross is an R package for simulating and plotting general experimental crosses.


Installation

You can install R/simcross from CRAN:

install.packages("simcross")

Vignette

A vignette describing the use of the package is available from within R (and also here). Load the package and then use the vignette function.

library(simcross)
vignette("simcross", package="simcross")

License

This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License, version 3, as published by the Free Software Foundation.

This program is distributed in the hope that it will be useful, but without any warranty; without even the implied warranty of merchantability or fitness for a particular purpose. See the GNU General Public License for more details.

A copy of the GNU General Public License, version 3, is available at https://www.r-project.org/Licenses/GPL-3

Metadata

Version

0.6

License

Unknown

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