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Description

Social Mixing Matrices for Infectious Disease Modelling.

Provides methods for sampling contact matrices from diary data for use in infectious disease modelling, as discussed in Mossong et al. (2008) <doi:10.1371/journal.pmed.0050074>.

Social mixing matrices for infectious disease modelling in R

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socialmixr is an R package to derive social mixing matrices from survey data.

Installation

The package can be installed using

install.packages("socialmixr")

The current development version can be installed using the remotes package

remotes::install_github("epiforecasts/socialmixr")

Documentation

For information on how to use the socialmixr package, see the introduction vignette.

Contributors

All contributions to this project are gratefully acknowledged using the allcontributors package following the allcontributors specification. Contributions of any kind are welcome!

Code

sbfnk, Bisaloo, lwillem, njtierney, alxsrobert, Degoot-AM, pearsonca, jarvisc1, jamesmbaazam, LloydChapman, mariabnd, ukhsa-tt

Issue Authors

bastistician, BlackEdder, Pinzo1, florpi, cchauve, thutran, dlaydon, deusthindwa, krivit, linyang17, cliu822, TimTaylor, NaomiWaterlow, aakhmetz, adamkucharski, chitrams, IsaacStopard, avallecam, maishaoshao, FrancescoBonacina

Issue Contributors

vikkytom, bahadzie, joshwlambert.

Metadata

Version

0.5.1

License

Unknown

Platforms (78)

    Darwin
    FreeBSD
    Genode
    GHCJS
    Linux
    MMIXware
    NetBSD
    none
    OpenBSD
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    Solaris
    uefi
    WASI
    Windows
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