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Description

Python-based execution environment for make-like workflows.

Snakemake is a workflow management system that aims to reduce the complexity of creating workflows by providing a fast and comfortable execution environment, together with a clean and readable specification language in Python style. Snakemake workflows are essentially Python scripts extended by declarative code to define rules. Rules describe how to create output files from input files.

Metadata

Version

8.4.12

License

Executables (1)

  • bin/snakemake

Platforms (29)

    Darwin
    Linux
    Windows
Show all
  • aarch64-darwin
  • aarch64-linux
  • armv5tel-linux
  • armv6l-linux
  • armv7a-darwin
  • armv7a-linux
  • armv7l-linux
  • i686-cygwin
  • i686-darwin
  • i686-linux
  • i686-windows
  • loongarch64-linux
  • m68k-linux
  • microblaze-linux
  • microblazeel-linux
  • mips-linux
  • mips64-linux
  • mips64el-linux
  • mipsel-linux
  • powerpc64-linux
  • powerpc64le-linux
  • riscv32-linux
  • riscv64-linux
  • s390-linux
  • s390x-linux
  • x86_64-cygwin
  • x86_64-darwin
  • x86_64-linux
  • x86_64-windows