Showing entries 101-123 out of 123.
Toolkit for processing sequences in FASTA/Q formats
Genetic variant annotation and effect prediction toolbox
Identify single nucleotide positions that are different between tumor and normal
Tools for filtering, mapping, and OTU-picking from shotgun genomics data
Software pipeline for building loci from short-read sequences
Spliced Transcripts Alignment to a Reference
Germline and small variant caller
High-performance read alignment, quantification and mutation discovery
Fast and exact comparison and clustering of sequences
Fast and exact comparison and clustering of sequences
Fast and exact comparison and clustering of sequences
Structural variant and INDEL caller for DNA sequencing data, using genome-wide local assembly
Find and characterise transposable element insertions
Inference of patterns of population splitting and mixing from genome-wide allele frequency data
Tandem Repeats Finder: a program to analyze DNA sequences
Tool for the automated removal of spurious sequences or poorly aligned regions from a multiple seq…
Flexible read trimming tool for Illumina NGS data
Structural variant comparison tool for VCFs
Variant calling and somatic mutation/CNV detection for next-generation sequencing data
Set of tools written in Perl and C++ for working with VCF files, such as those generated by the 10…
Speeding up the estimation of phylogenetic trees for large alignments through parallelization and …
Short read sequence mapper
Utility for post processing mapped reads that have been aligned to a primary genome and a secondar…