rPackages

Guiding the Integration of Multiple Single-Cell RNA-Seq Datasets

Interface to the SCIP Optimization Suite

Scientific Graphing Functions for Factorial Designs

Creates a Scientific Project Skeleton as an R Package

Summarize Data for Scientific Publication

Upgraded 'Rmarkdown' Themes for Scientific Writing

Single-Cell Imputation using Subspace Regression

Maximum-Likelihood Perfect Phylogeny Inference at Scale

Provides Some Useful Functions for Making Statistical Tables

Single-Cell Interpretable Tensor Decomposition

SciViews - Main package

Inferring Functional Gene Co-Expression Networks from Single Cell Data

Scaled Logistic Regression

R Toolbox for Unsupervised Spectral Clustering

Single-Case Meta-Analysis

Single Cell Mapper

Metabolic State Space and Trajectory Analysis for Single-Cell Data

Fitting Discrete Distribution Models to Count Data

Synthetic Control Method with Spillover Effects

Aligning Ontology Annotation Across Single Cell Datasets with 'scOntoMatch'

Spectral Clustering-Based Method for Identifying B Cell Clones

Read Ethoscope Data

Score Projection Between in 'Vivo' and in 'Vitro' Datasets

Spherically Constrained Optimization Routine

A Package to Score Behavioral Questionnaires

Credit Risk Scorecard

Credit Scorecard Modelling Utils

S-Core Graph Decomposition

Score Test Integrated with Empirical Bayes for Association Study

Score Matching Estimation by Automatic Differentiation

Peak Functions for Peak Detection in Univariate Time Series

Implementation of SCORE, SCORE+ and Mixed-SCORE

Simultaneous Confidence Region Excursion Sets

Proper Scoring Rules

A Collection of Loss Functions for Assessing Point Forecasts

Scoring Rules for Parametric and Simulated Distribution Forecasts

Utilities for Scoring and Assessing Predictions

Semi-Supervised Calibration of Risk with Noisy Event Times

Single Cell Oriented Reconstruction of PANDA Individually Optimized Networks

The ScottKnott Clustering Algorithm

The Scott-Knott Effect Size Difference (ESD) Test

Implements the Scout Method for Covariance-Regularized Regression

A Spotlight 'React' Widget for 'shiny' Apps

Simulate Controlled Outliers

Structured Covariances Estimators for Pairwise and Spatial Covariates

Identifying Synergistic Gene Pairs in Single-Cell and Spatial Transcriptomics

Functions for Planning and Managing Inventories in a Supply Chain

E-Statistics for Seurat Objects

Synthetic Control Methods

A Wrapper for 'Seurat' and Related R Packages for End-to-End Single Cell Analysis

Infer Ploidy of Single Cells

Plot Function for Single-Case Data Frames

Single-Cell Meta-Path Based Omic Embedding

Single Cell Poisson Probability Paradigm

Simplicially Constrained Regression Models for Proportions

Generate Publication Ready Visualizations of Single Cell Transcriptomics Data

Stability Controlled Quasi-Experimentation

Estimate Ploidy and Absolute Copy Number from Single Cell Sequencing

Empirical Sample Complexity Bounds

Scrape the Web with Extra Power

These Functions Fetch and Extract Text Content from Specified Web Pages

A Simple Web Scraper

Screen and clean variable selection procedures